We offer a variety of bioinformatics services:

  • Application containerization
  • Bacterial genome annotation
  • Bacterial genome assembly
  • Bacterial SNP discovery
  • Bioinformatics pipeline development
  • Bioinformatics software development
  • Causative mutation discovery
  • Comparative genomics analysis
  • Data processing and storage cost estimates for research proposals
  • Data visualization and figure generation
  • Database development
  • DNA traceability system design
  • Expert witness services related to bioinformatics, DNA, genotyping
  • Genome-wide association analysis (GWAS)
  • Genotype imputation
  • Genotype panel design
  • Genotyping by sequencing
  • Illumina and Affymetrix genotype format conversion (AB, Top, Forward, Design, Plus)
  • Merging of genotype datasets
  • Microbial metagenomics analysis
  • miRNA expression analysis
  • mRNA expression analysis
  • Parentage analysis
  • Pipelines for high-performance computing environments in Snakemake and Nextflow
  • Java, Python, Perl, R, Ruby, JavaScript software development
  • Sanger sequencing analysis
  • Sequence submission to NCBI and EBI
  • SNP and indel discovery, genotyping, and annotation
  • Structural variation discovery, genotyping, and annotation
  • Training in Linux, Perl, R, and high-performance computing
  • Variant submission to NCBI and EBI
  • Web server development