Format Conversion
Sequence Analysis
Sequence Figures
Random Sequences
Miscellaneous
The Sequence Manipulation Suite Copyright © 2000, 2004 Paul
Stothard. Send questions and comments to stothard@ualberta.ca
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Sequence Manipulation Suite: |
Color Align Conservation |
Color Align Conservation accepts a group of aligned
sequences (in FASTA or GDE format) and colors the alignment.
The program examines each residue and compares it to the
other residues in the same column. Residues that are
identical among the sequences are given a black background,
and those that are similar among the sequences are given a
gray background. The remaining residues receive a white
background. You can specify the percentage of residues that
must be identical and similar for the coloring to be
applied. Use Color Align Conservation to enhance the output
of sequence alignment programs.
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